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COMPGEOM
2006
ACM
14 years 12 days ago
I/O-efficient batched union-find and its applications to terrain analysis
Despite extensive study over the last four decades and numerous applications, no I/O-efficient algorithm is known for the union-find problem. In this paper we present an I/O-effic...
Pankaj K. Agarwal, Lars Arge, Ke Yi
IPPS
2006
IEEE
14 years 2 months ago
Exploiting processing locality through paging configurations in multitasked reconfigurable systems
FPGA chips in reconfigurable computer systems are used as malleable coprocessors where components of a hardware library of functions can be configured as needed. As the number of ...
T. Taher, Tarek A. El-Ghazawi
BMCBI
2010
190views more  BMCBI 2010»
13 years 8 months ago
APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
Background: It is well known that most of the binding free energy of protein interaction is contributed by a few key hot spot residues. These residues are crucial for understandin...
Jun-Feng Xia, Xing-Ming Zhao, Jiangning Song, De-S...
BMCBI
2011
13 years 8 days ago
Evaluating methods for ranking differentially expressed genes applied to MicroArray Quality Control data
Background: Statistical methods for ranking differentially expressed genes (DEGs) from gene expression data should be evaluated with regard to high sensitivity, specificity, and r...
Koji Kadota, Kentaro Shimizu
IBIS
2006
109views more  IBIS 2006»
13 years 8 months ago
Formulation Schema Matching Problem for Combinatorial Optimization Problem
: Schema matching is the task of finding semantic correspondences between elements of two schemas, which plays a key role in many database applications. In this paper, we cast the ...
Zhi Zhang, Pengfei Shi, Haoyang Che, Yong Sun, Jun...