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BMCBI
2010
117views more  BMCBI 2010»
13 years 10 months ago
Using jackknife to assess the quality of gene order phylogenies
Background: In recent years, gene order data has attracted increasing attention from both biologists and computer scientists as a new type of data for phylogenetic analysis. If ge...
Jian Shi, Yiwei Zhang, Haiwei Luo, Jijun Tang
BMCBI
2006
137views more  BMCBI 2006»
13 years 10 months ago
Genome BLAST distance phylogenies inferred from whole plastid and whole mitochondrion genome sequences
Background: Phylogenetic methods which do not rely on multiple sequence alignments are important tools in inferring trees directly from completely sequenced genomes. Here, we exte...
Alexander F. Auch, Stefan R. Henz, Barbara R. Holl...
JACM
2006
99views more  JACM 2006»
13 years 10 months ago
Finding a maximum likelihood tree is hard
Abstract. Maximum likelihood (ML) is an increasingly popular optimality criterion for selecting evolutionary trees [Felsenstein 1981]. Finding optimal ML trees appears to be a very...
Benny Chor, Tamir Tuller
CAD
2005
Springer
13 years 10 months ago
Lossless compression of predicted floating-point geometry
The size of geometric data sets in scientific and industrial applications is constantly increasing. Storing surface or volume meshes in standard uncompressed formats results in la...
Martin Isenburg, Peter Lindstrom, Jack Snoeyink
VLDB
2002
ACM
143views Database» more  VLDB 2002»
13 years 9 months ago
SQL Memory Management in Oracle9i
Complex database queries require the use of memory-intensive operators like sort and hashjoin. Those operators need memory, also referred to as SQL memory, to process their input ...
Benoît Dageville, Mohamed Zaït