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» An Intelligent System for Comparing Protein Structures
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BMCBI
2010
129views more  BMCBI 2010»
13 years 8 months ago
Automatic prediction of catalytic residues by modeling residue structural neighborhood
Background: Prediction of catalytic residues is a major step in characterizing the function of enzymes. In its simpler formulation, the problem can be cast into a binary classific...
Elisa Cilia, Andrea Passerini
CIKM
2008
Springer
13 years 10 months ago
Intra-document structural frequency features for semi-supervised domain adaptation
In this work we try to bridge the gap often encountered by researchers who find themselves with few or no labeled examples from their desired target domain, yet still have access ...
Andrew Arnold, William W. Cohen
BMCBI
2011
13 years 3 months ago
Hierarchical graphs for rule-based modeling of biochemical systems
Background: In rule-based modeling, graphs are used to represent molecules: a colored vertex represents a component of a molecule, a vertex attribute represents the internal state...
Nathan W. Lemons, Bin Hu, William S. Hlavacek
IJMI
2002
82views more  IJMI 2002»
13 years 8 months ago
Protein names and how to find them
A prerequisite for all higher level information extraction tasks is the identication of unknown names in text. Today, when large corpora can consist of billions of words, it is of...
Kristofer Franzén, Gunnar Eriksson, Fredrik...
AIEDU
2005
106views more  AIEDU 2005»
13 years 8 months ago
A Comparison of Model-Tracing and Constraint-Based Intelligent Tutoring Paradigms
Two approaches to building intelligent tutoring systems are the well-established model-tracing paradigm and the relatively newer constraint-based paradigm. Proponents of the constr...
Viswanathan Kodaganallur, Rob R. Weitz, David Rose...