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» An analysis framework for search sequences
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ISMB
1997
13 years 9 months ago
SEALS: A System for Easy Analysis of Lots of Sequences
We present a system of programs designed to facilitate sequence analysis projects involving large amounts of data. SEALS (System for Easy Analysis of Lots of Sequences) is a logic...
D. Roland Walker, Eugene V. Koonin
VLDB
2002
ACM
83views Database» more  VLDB 2002»
13 years 7 months ago
Searching on the Secondary Structure of Protein Sequences
In spite of the many decades of progress in database research, surprisingly scientists in the life sciences community still struggle with inefficient and awkward tools for queryin...
Laurie Hammel, Jignesh M. Patel
JUCS
2002
146views more  JUCS 2002»
13 years 7 months ago
A Framework for Semantics of UML Sequence Diagrams in PVS
: This paper presents a framework for representing formal semantics of a subset of the Unified Modeling Language (UML) notation in a higher-order logic, more specifically semantics...
Demissie B. Aredo
AIIA
2007
Springer
14 years 2 months ago
Structured Hidden Markov Model: A General Framework for Modeling Complex Sequences
Structured Hidden Markov Model (S-HMM) is a variant of Hierarchical Hidden Markov Model that shows interesting capabilities of extracting knowledge from symbolic sequences. In fact...
Ugo Galassi, Attilio Giordana, Lorenza Saitta
ISMB
1994
13 years 9 months ago
GeneQuiz: A Workbench for Sequence Analysis
Wepresent the prototype of a software system, cMledGeneQuiz,for large-scale biological sequence analysis. The system was designed to meet the needs that arise in computational seq...
Michael Scharf, Reinhard Schneider, Georg Casari, ...