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BMCBI
2011
12 years 11 months ago
Protein alignment algorithms with an efficient backtracking routine on multiple GPUs
Background: Pairwise sequence alignment methods are widely used in biological research. The increasing number of sequences is perceived as one of the upcoming challenges for seque...
Jacek Blazewicz, Wojciech Frohmberg, Michal Kierzy...
EUROPAR
2008
Springer
13 years 9 months ago
Scheduling Intersection Queries in Term Partitioned Inverted Files
Abstract. This paper proposes and presents a comparison of scheduling algorithms applied to the context of load balancing the query traffic on distributed inverted files. We put em...
Mauricio Marín, Carlos Gomez-Pantoja, Senen...
CLUSTER
2001
IEEE
13 years 11 months ago
Using Multirail Networks in High-Performance Clusters
Using multiple independent networks (also known as rails) is an emerging technique to overcome bandwidth limitations and enhance fault tolerance of current high-performance parall...
Salvador Coll, Eitan Frachtenberg, Fabrizio Petrin...
HIPC
2009
Springer
13 years 5 months ago
Highly scalable algorithm for distributed real-time text indexing
Stream computing research is moving from terascale to petascale levels. It aims to rapidly analyze data as it streams in from many sources and make decisions with high speed and a...
Ankur Narang, Vikas Agarwal, Monu Kedia, Vijay K. ...
PODC
2009
ACM
14 years 8 months ago
Correctness of gossip-based membership under message loss
Due to their simplicity and effectiveness, gossip-based membership protocols have become the method of choice for maintaining partial membership in large P2P systems. A variety of...
Maxim Gurevich, Idit Keidar