208 search results - page 30 / 42 » An evolutionary method for learning HMM structure: predictio... |
BMCBI
2008
13 years 7 months ago
2008
Background: A multiple sequence alignment (MSA) generated for a protein can be used to characterise residues by means of a statistical analysis of single columns. In addition to t...
WABI
2001
Springer
13 years 12 months ago
2001
Springer
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
ISMB
2000
13 years 9 months ago
2000
Knowing the number of residue contacts in a protein is crucial for deriving constraints useful in modeling protein folding, protein structure, and/or scoring remote homology searc...
BMCBI
2008
2008
WSPMaker: a web tool for calculating selection pressure in proteins and domains using window-sliding
13 years 7 months ago
Background: In the study of adaptive evolution, it is important to detect the protein coding sites where natural selection is acting. In general, the ratio of the rate of non-syno...
BMCBI
2008
13 years 7 months ago
2008
Background: Prediction of protein solvent accessibility, also called accessible surface area (ASA) prediction, is an important step for tertiary structure prediction directly from...