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IPL
2010
117views more  IPL 2010»
13 years 2 months ago
An improved algorithm for sorting by block-interchanges based on permutation groups
Yen-Lin Huang, Cheng-Chen Huang, Chuan Yi Tang, Ch...
SPAA
1996
ACM
13 years 11 months ago
From AAPC Algorithms to High Performance Permutation Routing and Sorting
Several recent papers have proposed or analyzed optimal algorithms to route all-to-all personalizedcommunication (AAPC) over communication networks such as meshes, hypercubes and ...
Thomas Stricker, Jonathan C. Hardwick
IPL
2008
86views more  IPL 2008»
13 years 7 months ago
A more efficient algorithm for perfect sorting by reversals
We describe a new algorithm for the problem of perfect sorting a signed permutation by reversals. The worst-case time complexity of this algorithm is parameterized by the maximum p...
Sèverine Bérard, Cedric Chauve, Chri...
IPL
2006
80views more  IPL 2006»
13 years 7 months ago
BubbleSearch: A simple heuristic for improving priority-based greedy algorithms
We introduce BubbleSearch, a general approach for extending priority-based greedy heuristics. Following the framework recently developed by Borodin et al., we consider priority al...
Neal Lesh, Michael Mitzenmacher
BMCBI
2008
138views more  BMCBI 2008»
13 years 7 months ago
Methods for simultaneously identifying coherent local clusters with smooth global patterns in gene expression profiles
Background: The hierarchical clustering tree (HCT) with a dendrogram [1] and the singular value decomposition (SVD) with a dimension-reduced representative map [2] are popular met...
Yin-Jing Tien, Yun-Shien Lee, Han-Ming Wu, Chun-Ho...