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BIBE
2005
IEEE
126views Bioinformatics» more  BIBE 2005»
14 years 1 months ago
Highly Scalable and Accurate Seeds for Subsequence Alignment
We propose a method for finding seeds for the local alignment of two nucleotide sequences. Our method uses randomized algorithms to find approximate seeds. We present a dynamic ...
Abhijit Pol, Tamer Kahveci
LCTRTS
2010
Springer
14 years 2 months ago
Analysis and approximation for bank selection instruction minimization on partitioned memory architecture
A large number of embedded systems include 8-bit microcontrollers for their energy efficiency and low cost. Multi-bank memory architecture is commonly applied in 8-bit microcontr...
Minming Li, Chun Jason Xue, Tiantian Liu, Yingchao...
HIPEAC
2007
Springer
14 years 1 months ago
Performance/Energy Optimization of DSP Transforms on the XScale Processor
The XScale processor family provides user-controllable independent configuration of CPU, bus, and memory frequencies. This feature introduces another handle for the code optimizat...
Paolo D'Alberto, Markus Püschel, Franz Franch...
PLDI
2006
ACM
14 years 1 months ago
Optimizing memory transactions
Atomic blocks allow programmers to delimit sections of code as ‘atomic’, leaving the language’s implementation to enforce atomicity. Existing work has shown how to implement...
Timothy L. Harris, Mark Plesko, Avraham Shinnar, D...
ATAL
2007
Springer
14 years 1 months ago
A complete distributed constraint optimization method for non-traditional pseudotree arrangements
Distributed Constraint Optimization (DCOP) is a general framework that can model complex problems in multi-agent systems. Several current algorithms that solve general DCOP instan...
James Atlas, Keith Decker