Sciweavers

178 search results - page 8 / 36
» An improved string composition method for sequence compariso...
Sort
View
CORR
2007
Springer
81views Education» more  CORR 2007»
13 years 8 months ago
Faster exon assembly by sparse spliced alignment
Assembling a gene from candidate exons is an important problem in computational biology. Among the most successful approaches to this problem is spliced alignment, proposed by Gelf...
Alexandre Tiskin
AAAI
2004
13 years 9 months ago
PROBCONS: Probabilistic Consistency-Based Multiple Alignment of Amino Acid Sequences
Obtaining an accurate multiple alignment of protein sequences is a difficult computational problem for which many heuristic techniques sacrifice optimality to achieve reasonable r...
Chuong B. Do, Michael Brudno, Serafim Batzoglou
NAACL
2010
13 years 5 months ago
Integrating Joint n-gram Features into a Discriminative Training Framework
Phonetic string transduction problems, such as letter-to-phoneme conversion and name transliteration, have recently received much attention in the NLP community. In the past few y...
Sittichai Jiampojamarn, Colin Cherry, Grzegorz Kon...
BIBM
2008
IEEE
125views Bioinformatics» more  BIBM 2008»
13 years 10 months ago
On the Role of Local Matching for Efficient Semi-supervised Protein Sequence Classification
Recent studies in protein sequence analysis have leveraged the power of unlabeled data. For example, the profile and mismatch neighborhood kernels have shown significant improveme...
Pavel P. Kuksa, Pai-Hsi Huang, Vladimir Pavlovic
BMCBI
2010
123views more  BMCBI 2010»
13 years 8 months ago
An improved classification of G-protein-coupled receptors using sequence-derived features
Background: G-protein-coupled receptors (GPCRs) play a key role in diverse physiological processes and are the targets of almost two-thirds of the marketed drugs. The 3 D structur...
Zhen-Ling Peng, Jian-Yi Yang, Xin Chen