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» An ontology for bioinformatics applications
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CORR
2010
Springer
157views Education» more  CORR 2010»
13 years 5 months ago
Constraint-Guided Workflow Composition Based on the EDAM Ontology
Abstract. Methods for the automatic composition of services into executable workflows need detailed knowledge about the application domain, in particular about the available servic...
Anna-Lena Lamprecht, Stefan Naujokat, Bernhard Ste...
SSDBM
1999
IEEE
135views Database» more  SSDBM 1999»
13 years 12 months ago
Query Processing in the TAMBIS Bioinformatics Source Integration System
Conducting bioinformatic analyses involves biologists in expressing requests over a range of highly heterogeneous information sources and software tools. Such activities are labor...
Norman W. Paton, Robert Stevens, Patricia G. Baker...
EON
2007
13 years 9 months ago
Benchmarking Reasoners for Multi-Ontology Applications
We describe an approach to create a synthetic workload for large scale extensional query answering experiments. The workload comprises multiple interrelated domain ontologies, data...
Ameet Chitnis, Abir Qasem, Jeff Heflin
BMCBI
2004
129views more  BMCBI 2004»
13 years 7 months ago
Integrating partonomic hierarchies in anatomy ontologies
Background Anatomy ontologies play an increasingly important role in developing integrated bioinformatics applications. One of the primary relationships between anatomical tissues...
Albert Burger, Duncan Davidson, Yiya Yang, Richard...
RP
2010
Springer
163views Control Systems» more  RP 2010»
13 years 5 months ago
Efficient Graph Reachability Query Answering Using Tree Decomposition
Efficient reachability query answering in large directed graphs has been intensively investigated because of its fundamental importance in many application fields such as XML data ...
Fang Wei