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» An ontology for bioinformatics applications
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ACSW
2006
13 years 9 months ago
Toward building grid applications in bioinformatics
In silico bioinformatics experiments involve integration of and access to computational tools and biological databases. The emerging grid computing technologies enable bioinformat...
Xiujun Gong, Kensuke Nakamura, Kei Yura, Nobuhiro ...
IPPS
2006
IEEE
14 years 1 months ago
An experimental study of optimizing bioinformatics applications
As bioinformatics is an emerging application of high performance computing, this paper first evaluates the memory performance of several representative bioinformatics application...
Guangming Tan, Lin Xu, Shengzhong Feng, Ninghui Su...
PCI
2005
Springer
14 years 1 months ago
Initial Experiences Porting a Bioinformatics Application to a Graphics Processor
Bioinformatics applications are one of the most relevant and compute-demanding applications today. While normally these applications are executed on clusters or dedicated parallel ...
Maria Charalambous, Pedro Trancoso, Alexandros Sta...
BMCBI
2006
87views more  BMCBI 2006»
13 years 7 months ago
XML schemas for common bioinformatic data types and their application in workflow systems
Background: Today, there is a growing need in bioinformatics to combine available software tools into chains, thus building complex applications from existing single-task tools. T...
Philipp N. Seibel, Jan Krüger, Sven Hartmeier...
CIKM
2003
Springer
14 years 27 days ago
HyperThesis: the gRNA spell on the curse of bioinformatics applications integration
In this paper, we describe a graphical workflow management system called HyperThesis to address the challenges of integrating bioinformatics applications. HyperThesis is an integ...
Sourav S. Bhowmick, Vivek Vedagiri, Amey V. Laud