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» An ontology for bioinformatics applications
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WIA
2007
Springer
14 years 3 months ago
Analyzing Ambiguity of Context-Free Grammars
It has been known since 1962 that the ambiguity problem for context-free grammars is undecidable. Ambiguity in context-free grammars is a recurring problem in language design and p...
Claus Brabrand, Robert Giegerich, Anders Mø...
AUIC
2006
IEEE
14 years 3 months ago
Visualising phylogenetic trees
• This paper describes techniques for visualising pairs of similar trees. Our aim is to develop ways of presenting the information so as to highlight both the common structure of...
Wan Nazmee Wan Zainon, Paul R. Calder
DNA
2005
Springer
132views Bioinformatics» more  DNA 2005»
14 years 2 months ago
DNA Recombination by XPCR
The first step of the Adleman-Lipton extract model in DNA computing is the combinatorial generation of libraries. In this paper a new method is proposed for generating a initial p...
Giuditta Franco, Vincenzo Manca, Cinzia Giagulli, ...
IPPS
2003
IEEE
14 years 2 months ago
Sequence Alignment on the Cray MTA-2
The standard algorithm for alignment of DNA sequences using dynamic programming has been implemented on the Cray MTA-2 (Multithreaded Architecture-2) at ENRI (Electronic Navigatio...
Shahid H. Bokhari, Jon R. Sauer
RIAO
2007
13 years 10 months ago
Optimizations of Local Edition for Evaluating Similarity Between Monophonic Musical Sequences
Abstract: Melody is an important property for the perceptual description of Western musical pieces. In the monophonic context, retrieval systems based on melodic similarity general...
Pierre Hanna, Pascal Ferraro