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» An ontology for bioinformatics applications
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FQAS
2009
Springer
157views Database» more  FQAS 2009»
14 years 3 months ago
On Fuzzy vs. Metric Similarity Search in Complex Databases
Abstract. The task of similarity search is widely used in various areas of computing, including multimedia databases, data mining, bioinformatics, social networks, etc. For a long ...
Alan Eckhardt, Tomás Skopal, Peter Vojt&aac...
LION
2009
Springer
114views Optimization» more  LION 2009»
14 years 3 months ago
Substitution Matrices and Mutual Information Approaches to Modeling Evolution
Abstract. Substitution matrices are at the heart of Bioinformatics: sequence alignment, database search, phylogenetic inference, protein family classication are based on Blosum, P...
Stephan Kitchovitch, Yuedong Song, Richard C. van ...
ICDM
2008
IEEE
136views Data Mining» more  ICDM 2008»
14 years 3 months ago
Generalized Framework for Syntax-Based Relation Mining
Supervised approaches to Data Mining are particularly appealing as they allow for the extraction of complex relations from data objects. In order to facilitate their application i...
Bonaventura Coppola, Alessandro Moschitti, Daniele...
ICPADS
2008
IEEE
14 years 3 months ago
Parallel Large Scale Inference of Protein Domain Families
The resolution of combinatorial assortments of protein sequences into domains is a prerequisite for protein sequence interpretation. However the recognition and clustering of homo...
Daniel Kahn, Clément Rezvoy, Fréd&ea...
GECCO
2007
Springer
190views Optimization» more  GECCO 2007»
14 years 3 months ago
Analysis of evolutionary algorithms for the longest common subsequence problem
In the longest common subsequence problem the task is to find the longest sequence of letters that can be found as subsequence in all members of a given finite set of sequences....
Thomas Jansen, Dennis Weyland