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» An ontology for bioinformatics applications
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SWAT
2004
Springer
98views Algorithms» more  SWAT 2004»
14 years 1 months ago
Tight Approximability Results for Test Set Problems in Bioinformatics
In this paper, we investigate the test set problem and its variations that appear in a variety of applications. In general, we are given a universe of objects to be “distinguish...
Piotr Berman, Bhaskar DasGupta, Ming-Yang Kao
DILS
2007
Springer
14 years 1 months ago
Bioinformatics Service Reconciliation by Heterogeneous Schema Transformation
This paper focuses on the problem of bioinformatics service reconciliation in a generic and scalable manner so as to enhance interoperability in a highly evolving field. Using XML...
Lucas Zamboulis, Nigel J. Martin, Alexandra Poulov...
BIOCOMP
2008
13 years 9 months ago
Bioinformatics Tools: Searching for Markers in DNA/RNA Sequences
Research in bioinformatics and computational biology relies heavily on algorithms that facilitate the understanding of biological processes through the application of statistical ...
Kuha Mahalingam, Omar Bagasra
BIB
2006
150views more  BIB 2006»
13 years 7 months ago
Open source tools and toolkits for bioinformatics: significance, and where are we?
This review summarizes important work in open-source bioinformatics software that has occurred over the past couple of years. The survey is intended to illustrate how programs and...
Jason E. Stajich, Hilmar Lapp
IPPS
2008
IEEE
14 years 2 months ago
Supporting high performance bioinformatics flat-file data processing using indices
As an essential part of in vitro analysis, biological database query has become more and more important in the research process. A few challenges that are specific to bioinformat...
Xuan Zhang, Gagan Agrawal