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BIOCOMP
2006
13 years 10 months ago
Statistical Analysis of Long-Range Interactions in Proteins
We carry out a comprehensive study of long-range interactions on a large data set of non-homologous proteins. Our study reveals that the long-range interactions between amino acid...
Jinmiao Chen, Narendra S. Chaudhari
BMCBI
2005
246views more  BMCBI 2005»
13 years 8 months ago
ParPEST: a pipeline for EST data analysis based on parallel computing
Background: Expressed Sequence Tags (ESTs) are short and error-prone DNA sequences generated from the 5' and 3' ends of randomly selected cDNA clones. They provide an im...
Nunzio D'Agostino, Mario Aversano, Maria Luisa Chi...
JMLR
2010
179views more  JMLR 2010»
13 years 3 months ago
PAC-Bayesian Analysis of Co-clustering and Beyond
We derive PAC-Bayesian generalization bounds for supervised and unsupervised learning models based on clustering, such as co-clustering, matrix tri-factorization, graphical models...
Yevgeny Seldin, Naftali Tishby
IJCNN
2000
IEEE
14 years 1 months ago
Metrics that Learn Relevance
We introduce an algorithm for learning a local metric to a continuous input space that measures distances in terms of relevance to the processing task. The relevance is defined a...
Samuel Kaski, Janne Sinkkonen
ECRTS
2002
IEEE
14 years 1 months ago
Scope-Tree: A Program Representation for Symbolic Worst-Case Execution Time Analysis
Most WCET analysis techniques only provide an upper bound on the worst case execution time as a constant value. However, it often appears that the execution time of a piece of cod...
Antoine Colin, Guillem Bernat