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GECCO
2006
Springer
220views Optimization» more  GECCO 2006»
13 years 11 months ago
Comparing evolutionary algorithms on the problem of network inference
In this paper, we address the problem of finding gene regulatory networks from experimental DNA microarray data. We focus on the evaluation of the performance of different evoluti...
Christian Spieth, Rene Worzischek, Felix Streicher...
TCBB
2010
114views more  TCBB 2010»
13 years 5 months ago
Cache-Oblivious Dynamic Programming for Bioinformatics
— We present efficient cache-oblivious algorithms for some well-studied string problems in bioinformatics including the longest common subsequence, global pairwise sequence alig...
Rezaul Alam Chowdhury, Hai-son Le, Vijaya Ramachan...
UPP
2004
Springer
14 years 21 days ago
Inverse Design of Cellular Automata by Genetic Algorithms: An Unconventional Programming Paradigm
Evolving solutions rather than computing them certainly represents an unconventional programming approach. The general methodology of evolutionary computation has already been know...
Thomas Bäck, Ron Breukelaar, Lars Willmes
JCB
2000
91views more  JCB 2000»
13 years 7 months ago
Scaling Laws and Similarity Detection in Sequence Alignment with Gaps
We study the problem of similarity detection by sequence alignment with gaps, using a recently established theoretical framework based on the morphology of alignment paths. Alignm...
Dirk Drasdo, Terence Hwa, Michael Lässig
ICALP
2003
Springer
14 years 17 days ago
Analysis of a Simple Evolutionary Algorithm for Minimization in Euclidean Spaces
Although evolutionary algorithms (EAs) are widely used in practical optimization, their theoretical analysis is still in its infancy. Up to now results on the (expected) runtime ar...
Jens Jägersküpper