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» Analyzing time series gene expression data
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SIGMOD
1997
ACM
134views Database» more  SIGMOD 1997»
13 years 11 months ago
Similarity-Based Queries for Time Series Data
We study similarity queries for time series data where similarity is defined in terms of a set of linear transformations on the Fourier series representation of a sequence. We ha...
Davood Rafiei, Alberto O. Mendelzon
JMLR
2011
175views more  JMLR 2011»
13 years 2 months ago
Causal Time Series Analysis of Functional Magnetic Resonance Imaging Data
This review focuses on dynamic causal analysis of functional magnetic resonance (fMRI) data to infer brain connectivity from a time series analysis and dynamical systems perspecti...
Alard Roebroeck, Anil K. Seth, Pedro A. Valdes-Sos...
BMCBI
2006
164views more  BMCBI 2006»
13 years 7 months ago
Evaluation of clustering algorithms for gene expression data
Background: Cluster analysis is an integral part of high dimensional data analysis. In the context of large scale gene expression data, a filtered set of genes are grouped togethe...
Susmita Datta, Somnath Datta
GECCO
2003
Springer
141views Optimization» more  GECCO 2003»
14 years 25 days ago
Finding the Optimal Gene Order in Displaying Microarray Data
The rapid advances of genome-scale sequencing have brought out the necessity of developing new data processing techniques for enormous genomic data. Microarrays, for example, can g...
Seung-Kyu Lee, Yong-Hyuk Kim, Byung Ro Moon
BMCBI
2006
128views more  BMCBI 2006»
13 years 7 months ago
An interactive tool for visualization of relationships between gene expression profiles
Background: Application of phenetic methods to gene expression analysis proved to be a successful approach. Visualizing the results in a 3-dimentional space may further enhance th...
Peter Ruzanov, Steven J. M. Jones