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» Annotating Genes Using Textual Patterns
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SIGIR
2005
ACM
14 years 1 months ago
An application of text categorization methods to gene ontology annotation
This paper describes an application of IR and text categorization methods to a highly practical problem in biomedicine, specifically, Gene Ontology (GO) annotation. GO annotation...
Kazuhiro Seki, Javed Mostafa
BIRD
2007
Springer
154views Bioinformatics» more  BIRD 2007»
14 years 1 months ago
Mining Spatial Gene Expression Data for Association Rules
Abstract. We analyse data from the Edinburgh Mouse Atlas GeneExpression Database (EMAGE) which is a high quality data source for spatio-temporal gene expression patterns. Using a n...
Jano I. van Hemert, Richard A. Baldock
KDD
1995
ACM
173views Data Mining» more  KDD 1995»
13 years 11 months ago
Knowledge Discovery in Textual Databases (KDT)
The information age is characterizedby a rapid growth in the amountof information availablein electronicmedia. Traditional data handling methods are not adequate to cope with this...
Ronen Feldman, Ido Dagan
BMCBI
2010
155views more  BMCBI 2010»
13 years 7 months ago
A bi-ordering approach to linking gene expression with clinical annotations in gastric cancer
Background: In the study of cancer genomics, gene expression microarrays, which measure thousands of genes in a single assay, provide abundant information for the investigation of...
Fan Shi, Christopher Leckie, Geoff MacIntyre, Izha...
CIBCB
2007
IEEE
13 years 11 months ago
Associative Artificial Neural Network for Discovery of Highly Correlated Gene Groups Based on Gene Ontology and Gene Expression
Abstract-- The advance of high-throughput experimental technologies poses continuous challenges to computational data analysis in functional and comparative genomics studies. Gene ...
Ji He, Xinbin Dai, Xuechun Zhao