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CSB
2005
IEEE
133views Bioinformatics» more  CSB 2005»
14 years 1 months ago
Biological Pathway Prediction from Multiple Data Sources Using Iterative Bayesian Updating
There is a diversity of functional genomics data, such as gene expression data from microarray experiments, phenotypic data from gene deletion experiments, protein-protein interac...
Corey Powell, Joshua M. Stuart
BIOINFORMATICS
2007
66views more  BIOINFORMATICS 2007»
13 years 7 months ago
Gene expression network analysis and applications to immunology
We address the problem of using expression data and prior biological knowledge to identify differentially expressed pathways or groups of genes. Following an idea of Ideker et al...
Serban Nacu, Rebecca Critchley-Thorne, Peter Lee, ...
BIOINFORMATICS
2007
161views more  BIOINFORMATICS 2007»
13 years 7 months ago
Functional evaluation of domain-domain interactions and human protein interaction networks
: Large amounts of protein and domain interaction data are being produced by experimental high-throughput techniques and computational approaches. To gain insight into the value of...
Andreas Schlicker, Carola Huthmacher, Fidel Ram&ia...
ISMIS
2005
Springer
14 years 27 days ago
Towards Ad-Hoc Rule Semantics for Gene Expression Data
The notion of rules is very popular and appears in different flavors, for example as association rules in data mining or as functional (or multivalued) dependencies in databases. ...
Marie Agier, Jean-Marc Petit, Einoshin Suzuki
ICANN
2005
Springer
14 years 27 days ago
High-Throughput Multi-dimensional Scaling (HiT-MDS) for cDNA-Array Expression Data
Multidimensional Scaling (MDS) is a powerful dimension reduction technique for embedding high-dimensional data into a lowdimensional target space. Thereby, the distance relationshi...
Marc Strickert, Stefan Teichmann, Nese Sreenivasul...