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BMCBI
2005
114views more  BMCBI 2005»
13 years 8 months ago
AutoFACT: An Automatic Functional Annotation and Classification Tool
Background: Assignment of function to new molecular sequence data is an essential step in genomics projects. The usual process involves similarity searches of a given sequence aga...
Liisa B. Koski, Michael W. Gray, B. Franz Lang, Ge...
BMCBI
2008
204views more  BMCBI 2008»
13 years 8 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...
CGO
2009
IEEE
14 years 3 months ago
Software Pipelined Execution of Stream Programs on GPUs
—The StreamIt programming model has been proposed to exploit parallelism in streaming applications on general purpose multicore architectures. This model allows programmers to sp...
Abhishek Udupa, R. Govindarajan, Matthew J. Thazhu...
ICALP
2007
Springer
14 years 2 months ago
Lower Bounds for Quantile Estimation in Random-Order and Multi-pass Streaming
We present lower bounds on the space required to estimate the quantiles of a stream of numerical values. Quantile estimation is perhaps the most studied problem in the data stream ...
Sudipto Guha, Andrew McGregor
ICDCS
2002
IEEE
14 years 1 months ago
On Peer-to-Peer Media Streaming
In this paper, we study a peer-to-peer media streaming system with the following characteristics: (1) its streaming capacity grows dynamically; (2) peers do not exhibit serverlike...
Dongyan Xu, Mohamed Hefeeda, Susanne E. Hambrusch,...