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SEMWEB
2010
Springer
13 years 5 months ago
Converting and Annotating Quantitative Data Tables
Companies, governmental agencies and scientists produce a large amount of quantitative (research) data, consisting of measurements ranging from e.g. the surface temperatures of an ...
Mark van Assem, Hajo Rijgersberg, Mari Wigham, Jan...
BMCBI
2008
137views more  BMCBI 2008»
13 years 8 months ago
Evading the annotation bottleneck: using sequence similarity to search non-sequence gene data
Background: Non-sequence gene data (images, literature, etc.) can be found in many different public databases. Access to these data is mostly by text based methods using gene name...
Michael J. Gilchrist, Mikkel B. Christensen, Richa...
BMCBI
2004
228views more  BMCBI 2004»
13 years 7 months ago
An XML standard for the dissemination of annotated 2D gel electrophoresis data complemented with mass spectrometry results
Background: Many proteomics initiatives require a seamless bioinformatics integration of a range of analytical steps between sample collection and systems modeling immediately ass...
Romesh Stanislaus, Liu Hong Jiang, Martha Swartz, ...
ICWE
2007
Springer
14 years 1 months ago
Fixing Weakly Annotated Web Data Using Relational Models
In this paper, we present a fast and scalable Bayesian model for improving weakly annotated data – which is typically generated by a (semi) automated information extraction (IE) ...
Fatih Gelgi, Srinivas Vadrevu, Hasan Davulcu
BMCBI
2010
96views more  BMCBI 2010»
13 years 8 months ago
ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data
Background: Chromatin immunoprecipitation (ChIP) followed by high-throughput sequencing (ChIP-seq) or ChIP followed by genome tiling array analysis (ChIP-chip) have become standar...
Lihua J. Zhu, Claude Gazin, Nathan D. Lawson, Herv...