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JAR
2007
72views more  JAR 2007»
13 years 7 months ago
Inferring Phylogenetic Trees Using Answer Set Programming
We describe the reconstruction of a phylogeny for a set of taxa, with a character-based cladistics approach, in a declarative knowledge representation formalism, and show how to u...
Daniel R. Brooks, Esra Erdem, Selim T. Erdogan, Ja...
KR
2010
Springer
14 years 13 days ago
Repair and Prediction (under Inconsistency) in Large Biological Networks with Answer Set Programming
We address the problem of repairing large-scale biological networks and corresponding yet often discrepant measurements in order to predict unobserved variations. To this end, we ...
Martin Gebser, Carito Guziolowski, Mihail Ivanchev...
ASP
2001
Springer
14 years 5 days ago
Answer Set Programming and Bounded Model Checking
In this paper bounded model checking of asynchronous concurrent systems is introduced as a promising application area for answer set programming. This is an extension of earlier w...
Keijo Heljanko, Ilkka Niemelä
FLAIRS
2008
13 years 10 months ago
Answer Set Programming on Expert Feedback to Populate and Extend Dynamic Ontologies
The next generation of online reference works will require structured representations of their contents in order to support scholarly functions such as semantic search, automated ...
Mathias Niepert, Cameron Buckner, Colin Allen
IJDMB
2011
129views more  IJDMB 2011»
12 years 11 months ago
Modelling gene and protein regulatory networks with Answer Set Programming
: Recently, many approaches to model regulatory networks have been proposed in the systems biology domain, however the task is far from being solved. In this paper we propose an an...
Timur Fayruzov, Jeroen Janssen, Dirk Vermeir, Chri...