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BMCBI
2006
127views more  BMCBI 2006»
13 years 7 months ago
Using local gene expression similarities to discover regulatory binding site modules
Background: We present an approach designed to identify gene regulation patterns using sequence and expression data collected for Saccharomyces cerevisae. Our main goal is to rela...
Bartek Wilczynski, Torgeir R. Hvidsten, Andriy Kry...
NIPS
2004
13 years 8 months ago
Active Learning for Anomaly and Rare-Category Detection
We introduce a novel active-learning scenario in which a user wants to work with a learning algorithm to identify useful anomalies. These are distinguished from the traditional st...
Dan Pelleg, Andrew W. Moore
RECOMB
2008
Springer
14 years 7 months ago
Integrating Sequence and Topology for Efficient and Accurate Detection of Horizontal Gene Transfer
Abstract. One phylogeny-based approach to horizontal gene transfer (HGT) detection entails comparing the topology of a gene tree to that of the species tree, and using their differ...
Cuong Than, Guohua Jin, Luay Nakhleh
WSDM
2012
ACM
301views Data Mining» more  WSDM 2012»
12 years 2 months ago
Learning evolving and emerging topics in social media: a dynamic nmf approach with temporal regularization
As massive repositories of real-time human commentary, social media platforms have arguably evolved far beyond passive facilitation of online social interactions. Rapid analysis o...
Ankan Saha, Vikas Sindhwani
BMCBI
2006
184views more  BMCBI 2006»
13 years 7 months ago
PathSys: integrating molecular interaction graphs for systems biology
Background: The goal of information integration in systems biology is to combine information from a number of databases and data sets, which are obtained from both high and low th...
Michael Baitaluk, Xufei Qian, Shubhada Godbole, Al...