Sciweavers

56 search results - page 2 / 12
» Application of Graph-based Data Mining to Metabolic Pathways
Sort
View
BMCBI
2006
103views more  BMCBI 2006»
13 years 7 months ago
Meta-All: a system for managing metabolic pathway information
Background: Many attempts are being made to understand biological subjects at a systems level. A major resource for these approaches are biological databases, storing manifold inf...
Stephan Weise, Ivo Grosse, Christian Klukas, Dirk ...
BMCBI
2010
167views more  BMCBI 2010»
13 years 7 months ago
Bi-directional gene set enrichment and canonical correlation analysis identify key diet-sensitive pathways and biomarkers of met
Background: Currently, a number of bioinformatics methods are available to generate appropriate lists of genes from a microarray experiment. While these lists represent an accurat...
Melissa J. Morine, Jolene McMonagle, Sinead Toomey...
PAKDD
2007
ACM
183views Data Mining» more  PAKDD 2007»
14 years 1 months ago
Translation and Rotation Invariant Mining of Frequent Trajectories: Application to Protein Unfolding Pathways
We present a framework for mining frequent trajectories, which are translated and/or rotated with respect to one another. We then discuss a multiresolution methodology, based on th...
Alexander Andreopoulos, Bill Andreopoulos, Aijun A...
BMCBI
2006
172views more  BMCBI 2006»
13 years 7 months ago
BioWarehouse: a bioinformatics database warehouse toolkit
Background: This article addresses the problem of interoperation of heterogeneous bioinformatics databases. Results: We introduce BioWarehouse, an open source toolkit for construc...
Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Pr...
CGF
2008
142views more  CGF 2008»
13 years 7 months ago
Visualizing Genome Expression and Regulatory Network Dynamics in Genomic and Metabolic Context
DNA microarrays are used to measure the expression levels of thousands of genes simultaneously. In a time series experiment, the gene expressions are measured as a function of tim...
Michel A. Westenberg, Sacha A. F. T. van Hijum, Os...