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BMCBI
2006
205views more  BMCBI 2006»
13 years 10 months ago
Application of Petri net based analysis techniques to signal transduction pathways
Background: Signal transduction pathways are usually modelled using classical quantitative methods, which are based on ordinary differential equations (ODEs). However, some diffic...
Andrea Sackmann, Monika Heiner, Ina Koch
BMCBI
2010
134views more  BMCBI 2010»
13 years 10 months ago
ScreenMill: A freely available software suite for growth measurement, analysis and visualization of high-throughput screen data
Background: Many high-throughput genomic experiments, such as Synthetic Genetic Array and yeast two-hybrid, use colony growth on solid media as a screen metric. These experiments ...
John C. Dittmar, Robert J. D. Reid, Rodney Rothste...
BMCBI
2010
147views more  BMCBI 2010»
13 years 10 months ago
Learning biological network using mutual information and conditional independence
Background: Biological networks offer us a new way to investigate the interactions among different components and address the biological system as a whole. In this paper, a revers...
Dong-Chul Kim, Xiaoyu Wang, Chin-Rang Yang, Jean G...
LION
2009
Springer
114views Optimization» more  LION 2009»
14 years 4 months ago
Substitution Matrices and Mutual Information Approaches to Modeling Evolution
Abstract. Substitution matrices are at the heart of Bioinformatics: sequence alignment, database search, phylogenetic inference, protein family classication are based on Blosum, P...
Stephan Kitchovitch, Yuedong Song, Richard C. van ...
PSD
2010
Springer
108views Database» more  PSD 2010»
13 years 8 months ago
Disclosure Risk of Synthetic Population Data with Application in the Case of EU-SILC
In survey statistics, simulation studies are usually performed by repeatedly drawing samples from population data. Furthermore, population data may be used in courses on survey sta...
Matthias Templ, Andreas Alfons