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BMCBI
2010
243views more  BMCBI 2010»
13 years 6 months ago
Comparative study of unsupervised dimension reduction techniques for the visualization of microarray gene expression data
Background: Visualization of DNA microarray data in two or three dimensional spaces is an important exploratory analysis step in order to detect quality issues or to generate new ...
Christoph Bartenhagen, Hans-Ulrich Klein, Christia...
SODA
2004
ACM
82views Algorithms» more  SODA 2004»
13 years 8 months ago
Dynamizing static algorithms, with applications to dynamic trees and history independence
We describe a machine model for automatically dynamizing static algorithms and apply it to historyindependent data structures. Static programs expressed in this model are dynamize...
Umut A. Acar, Guy E. Blelloch, Robert Harper, Jorg...
CLOUDCOM
2010
Springer
13 years 4 months ago
A Study in Hadoop Streaming with Matlab for NMR Data Processing
Applying Cloud computing techniques for analyzing large data sets has shown promise in many data-driven scientific applications. Our approach presented here is to use Cloud comput...
Kalpa Gunaratna, Paul Anderson, Ajith Ranabahu, Am...
ICCS
2001
Springer
13 years 11 months ago
High-Performance Algorithm Engineering for Computational Phylogenetics
Abstract. Phylogeny reconstruction from molecular data poses complex optimization problems: almost all optimization models are NP-hard and thus computationally intractable. Yet app...
Bernard M. E. Moret, David A. Bader, Tandy Warnow
DSN
2005
IEEE
14 years 9 days ago
A Wavefront Parallelisation of CTMC Solution Using MTBDDs
In this paper, we present a parallel implementation for the steady-state analysis of continuous-time Markov chains (CTMCs). This analysis is performed via solution of a linear equ...
Yi Zhang, David Parker, Marta Z. Kwiatkowska