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BMCBI
2010
143views more  BMCBI 2010»
13 years 8 months ago
An efficient biological pathway layout algorithm combining grid-layout and spring embedder for complicated cellular location inf
Background: Graph drawing is one of the important techniques for understanding biological regulations in a cell or among cells at the pathway level. Among many available layout al...
Kaname Kojima, Masao Nagasaki, Satoru Miyano
BMCBI
2010
178views more  BMCBI 2010»
13 years 8 months ago
Applications of a formal approach to decipher discrete genetic networks
Background: A growing demand for tools to assist the building and analysis of biological networks exists in systems biology. We argue that the use of a formal approach is relevant...
Fabien Corblin, Eric Fanchon, Laurent Trilling
BMCBI
2006
195views more  BMCBI 2006»
13 years 8 months ago
Hubs of knowledge: using the functional link structure in Biozon to mine for biologically significant entities
Background: Existing biological databases support a variety of queries such as keyword or definition search. However, they do not provide any measure of relevance for the instance...
Paul Shafer, Timothy Isganitis, Golan Yona
CIKM
2010
Springer
13 years 7 months ago
Multi-view clustering with constraint propagation for learning with an incomplete mapping between views
Multi-view learning algorithms typically assume a complete bipartite mapping between the different views in order to exchange information during the learning process. However, ma...
Eric Eaton, Marie desJardins, Sara Jacob
BMCBI
2011
13 years 7 days ago
PRIN, a predicted rice interactome network
Background: Protein-protein interactions play a fundamental role in elucidating the molecular mechanisms of biomolecular function, signal transductions and metabolic pathways of l...
Haibin Gu, Pengcheng Zhu, Yinming Jiao, Yijun Meng...