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BMCBI
2008
155views more  BMCBI 2008»
13 years 7 months ago
Prediction of regulatory elements in mammalian genomes using chromatin signatures
Background: Recent genomic scale survey of epigenetic states in the mammalian genomes has shown that promoters and enhancers are correlated with distinct chromatin signatures, pro...
Kyoung-Jae Won, Iouri Chepelev, Bing Ren, Wei Wang
BMCBI
2008
158views more  BMCBI 2008»
13 years 7 months ago
Bioinformatics in Italy: BITS2007, the fourth annual meeting of the Italian Society of Bioinformatics
spectives. A total of 149 abstracts were accepted and presented in the poster session and 31 of them were selected for oral presentation. At the opening of the meeting, Roderic Gui...
Graziano Pesole, Manuela Helmer-Citterich
EOR
2008
106views more  EOR 2008»
13 years 7 months ago
Convergent Lagrangian heuristics for nonlinear minimum cost network flows
We consider the separable nonlinear and strictly convex single-commodity network flow problem (SSCNFP). We develop a computational scheme for generating a primal feasible solution...
Torbjörn Larsson, Johan Marklund, Caroline Ol...
BMCBI
2006
155views more  BMCBI 2006»
13 years 7 months ago
CAVER: a new tool to explore routes from protein clefts, pockets and cavities
Background: The main aim of this study was to develop and implement an algorithm for the rapid, accurate and automated identification of paths leading from buried protein clefts, ...
Martin Petrek, Michal Otyepka, Pavel Banás,...
IPM
2008
100views more  IPM 2008»
13 years 7 months ago
Query-level loss functions for information retrieval
Many machine learning technologies such as support vector machines, boosting, and neural networks have been applied to the ranking problem in information retrieval. However, since...
Tao Qin, Xu-Dong Zhang, Ming-Feng Tsai, De-Sheng W...