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» Approximate Global Alignment of Sequences
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AINA
2008
IEEE
15 years 9 months ago
Introducing Variable Gap Penalties into Three-Sequence Alignment for Protein Sequences
The common-use gap penalty strategies, constant penalty and affine gap penalty, have been adopted in the traditional three-sequence alignment algorithm which considers the inserti...
Che-Lun Hung, Chun-Yuan Lin, Yeh-Ching Chung, Chua...
BIOINFORMATICS
2010
91views more  BIOINFORMATICS 2010»
15 years 3 months ago
GASSST: global alignment short sequence search tool
Guillaume Rizk, Dominique Lavenier
BIOINFORMATICS
2000
85views more  BIOINFORMATICS 2000»
15 years 2 months ago
VISTA : visualizing global DNA sequence alignments of arbitrary length
Chris Mayor, Michael Brudno, Jody R. Schwartz, Ale...
PAMI
2011
14 years 10 months ago
Approximately Global Optimization for Robust Alignment of Generalized Shapes
—In this paper, we introduce a novel method to solve shape alignment problems. We use gray-scale “images” to represent source shapes, and propose a novel two-component Gaussi...
Hongsheng Li, Tian Shen, Xiaolei Huang