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GCB
2004
Springer
91views Biometrics» more  GCB 2004»
14 years 1 months ago
A Method for Fast Approximate Searching of Polypeptide Structures in the PDB
: The main contribution of this paper is a novel approach for fast searching in huge structural databases like the PDB. The data structure is based on an adaption of the generalize...
Hanjo Täubig, Arno Buchner, Jan Griebsch
ISMB
1997
13 years 9 months ago
Standardized Representations of the Literature: Combining Diverse Sources of Ribosomal Data
We are building a knowledge base (KB) of published structural data on the 30s ribosomal subunit in prokaryotes. Our KB is distinguished by a standardized representation of biologi...
Russ B. Altman, Neil F. Abernethy, Richard O. Chen
VLDB
2004
ACM
227views Database» more  VLDB 2004»
14 years 1 months ago
Approximate NN queries on Streams with Guaranteed Error/performance Bounds
In data stream applications, data arrive continuously and can only be scanned once as the query processor has very limited memory (relative to the size of the stream) to work with...
Nick Koudas, Beng Chin Ooi, Kian-Lee Tan, Rui Zhan...
ICDE
2005
IEEE
103views Database» more  ICDE 2005»
14 years 9 months ago
Vectorizing and Querying Large XML Repositories
Vertical partitioning is a well-known technique for optimizing query performance in relational databases. An extreme form of this technique, which we call vectorization, is to sto...
Peter Buneman, Byron Choi, Wenfei Fan, Robert Hutc...
ICDE
2010
IEEE
295views Database» more  ICDE 2010»
14 years 2 months ago
K nearest neighbor queries and kNN-Joins in large relational databases (almost) for free
— Finding the k nearest neighbors (kNN) of a query point, or a set of query points (kNN-Join) are fundamental problems in many application domains. Many previous efforts to solve...
Bin Yao, Feifei Li, Piyush Kumar