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IPPS
2010
IEEE
13 years 6 months ago
pFANGS: Parallel high speed sequence mapping for Next Generation 454-roche Sequencing reads
Millions of DNA sequences (reads) are generated by Next Generation Sequencing machines everyday. There is a need for high performance algorithms to map these sequences to the refer...
Sanchit Misra, Ramanathan Narayanan, Wei-keng Liao...
SDM
2007
SIAM
106views Data Mining» more  SDM 2007»
13 years 10 months ago
Approximating Representations for Large Numerical Databases
The paper introduces a notion of support for realvalued functions. It is shown how to approximate supports of a large class of functions based on supports of so called polynomial ...
Szymon Jaroszewicz, Marcin Korzen
KDD
2001
ACM
203views Data Mining» more  KDD 2001»
14 years 9 months ago
Ensemble-index: a new approach to indexing large databases
The problem of similarity search (query-by-content) has attracted much research interest. It is a difficult problem because of the inherently high dimensionality of the data. The ...
Eamonn J. Keogh, Selina Chu, Michael J. Pazzani
BIBE
2003
IEEE
183views Bioinformatics» more  BIBE 2003»
14 years 2 months ago
Effective Indexing and Filtering for Similarity Search in Large Biosequence Databases
We present a multi-dimensional indexing approach for fast sequence similarity search in DNA and protein databases. In particular, we propose effective transformations of subsequen...
Ozgur Ozturk, Hakan Ferhatosmanoglu
BTW
2007
Springer
292views Database» more  BTW 2007»
14 years 21 days ago
Effective and Efficient Indexing for Large Video Databases
Abstract: Content based multimedia retrieval is an important topic in database systems. An emerging and challenging topic in this area is the content based search in video data. A ...
Christian Böhm, Peter Kunath, Alexey Pryakhin...