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» Approximating the Number of Network Motifs
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WAW
2009
Springer
129views Algorithms» more  WAW 2009»
14 years 5 months ago
Approximating the Number of Network Motifs
Mira Gonen, Yuval Shavitt
BMCBI
2010
124views more  BMCBI 2010»
13 years 11 months ago
Estimation and efficient computation of the true probability of recurrence of short linear protein sequence motifs in unrelated
Background: Large datasets of protein interactions provide a rich resource for the discovery of Short Linear Motifs (SLiMs) that recur in unrelated proteins. However, existing met...
Norman E. Davey, Richard J. Edwards, Denis C. Shie...
BMCBI
2006
144views more  BMCBI 2006»
13 years 11 months ago
More robust detection of motifs in coexpressed genes by using phylogenetic information
Background: Several motif detection algorithms have been developed to discover overrepresented motifs in sets of coexpressed genes. However, in a noisy gene list, the number of ge...
Pieter Monsieurs, Gert Thijs, Abeer A. Fadda, Sigr...
BMCBI
2006
112views more  BMCBI 2006»
13 years 11 months ago
A correlated motif approach for finding short linear motifs from protein interaction networks
Background: An important class of interaction switches for biological circuits and disease pathways are short binding motifs. However, the biological experiments to find these bin...
Soon-Heng Tan, Hugo Willy, Wing-Kin Sung, See-Kion...
CDC
2008
IEEE
14 years 5 months ago
Noise suppression in auto-regulatory gene networks
— Living cells are characterized by small populations of key molecular components that have large stochastic noise associated with them. Various gene network motifs exists within...
Abhyudai Singh, João Pedro Hespanha