65 search results - page 7 / 13 » Approximation Algorithms for Optimal RNA Secondary Structure... |
NAR
2007
13 years 7 months ago
2007
Many non-coding RNA genes and cis-acting regulatory elements of mRNAs contain RNA secondary structures that are critical for their function. Such functional RNAs can be predicted ...
BMCBI
2008
13 years 8 months ago
2008
Background: Evolutionary conservation of RNA secondary structure is a typical feature of many functional non-coding RNAs. Since almost all of the available methods used for predic...
WABI
2010
Springer
13 years 6 months ago
2010
Springer
Abstract. We present three heuristic strategies for folding RNA sequences into secondary structures including kissing hairpin motifs. The new idea is to construct a kissing hairpin...
BMCBI
2005
13 years 7 months ago
2005
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
JCB
2007
13 years 7 months ago
2007
We developed a dynamic programming approach of computing common sequence structure patterns among two RNAs given their primary sequences and their secondary structures. Common pat...