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PR
1998
86views more  PR 1998»
13 years 8 months ago
Optimizing the cost matrix for approximate string matching using genetic algorithms
This paper describes a method for optimizing the cost matrix of any approximate string matching algorithm based on the Levenshtein distance. The method, which uses genetic algorit...
Marc Parizeau, Nadia Ghazzali, Jean-Françoi...
RECOMB
2010
Springer
13 years 7 months ago
An Approximation Algorithm for Computing a Parsimonious First Speciation in the Gene Duplication Model
We consider the following problem: given a forest of gene family trees on a set of genomes, find a first speciation which splits these genomes into two subsets and minimizes the ...
Aïda Ouangraoua, Krister M. Swenson, Cedric C...
RSA
2010
104views more  RSA 2010»
13 years 7 months ago
An approximation algorithm for counting contingency tables
Abstract. We present a randomized approximation algorithm for counting contingency tables, m × n non-negative integer matrices with given row sums R = (r1, . . . , rm) and column ...
Alexander I. Barvinok, Zur Luria, Alex Samorodnits...
ANCS
2010
ACM
13 years 6 months ago
A traffic-aware top-N firewall ruleset approximation algorithm
Packet classification is widely used in various network security and operation applications. Two of the main challenges are the increasing number of classification rules, amount o...
Ho-Yu Lam, Donghan (Jarod) Wang, H. Jonathan Chao
CPM
2000
Springer
160views Combinatorics» more  CPM 2000»
14 years 1 months ago
Approximation Algorithms for Hamming Clustering Problems
We study Hamming versions of two classical clustering problems. The Hamming radius p-clustering problem (HRC) for a set S of k binary strings, each of length n, is to find p bina...
Leszek Gasieniec, Jesper Jansson, Andrzej Lingas