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BMCBI
2004
159views more  BMCBI 2004»
13 years 10 months ago
Extractor for ESI quadrupole TOF tandem MS data enabled for high throughput batch processing
Background: Mass spectrometry based proteomics result in huge amounts of data that has to be processed in real time in order to efficiently feed identification algorithms and to e...
Andreas M. Boehm, Robert P. Galvin, Albert Sickman...
DILS
2005
Springer
14 years 3 months ago
PLATCOM: Current Status and Plan for the Next Stages
We have been developing a system for comparing multiple genomes, PLATCOM, where users can choose genomes of their choice freely and perform analysis of the selected genomes with a...
Kwangmin Choi, Jeong-Hyeon Choi, Amit Saple, Zhipi...
VLDB
1998
ACM
120views Database» more  VLDB 1998»
14 years 2 months ago
KODA - The Architecture And Interface of a Data Model Independent Kernel
In this paper we describe the architecture and interface of KODA, a production strength database kernel. KODA is unique in the industry in its ability to support two different dat...
Gopalan Arun, Ashok Joshi
BMCBI
2008
104views more  BMCBI 2008»
13 years 10 months ago
InteroPORC: an automated tool to predict highly conserved protein interaction networks
teps. First, we abstracted protein interactions onto orthologous cluster links. For a given source interaction, if both proteins belonged to a cluster, we constructed a link betwee...
Magali Michaut, Samuel Kerrien, Luisa Montecchi-Pa...
BICOB
2009
Springer
14 years 4 months ago
A Bayesian Approach to High-Throughput Biological Model Generation
Abstract. With the availability of hundreds and soon-to-be thousands of complete genomes, the construction of genome-scale metabolic models for these organisms has attracted much a...
Xinghua Shi, Rick L. Stevens