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» Array-based Genome Comparison of Arabidopsis Ecotypes using ...
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70
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BIOSTEC
2009
116views Healthcare» more  BIOSTEC 2009»
15 years 3 months ago
Array-based Genome Comparison of Arabidopsis Ecotypes using Hidden Markov Models
Michael Seifert, Ali Banaei, Jens Keilwagen, Micha...
BMCBI
2006
147views more  BMCBI 2006»
15 years 2 months ago
A hidden Markov model approach for determining expression from genomic tiling micro arrays
Background: Genomic tiling micro arrays have great potential for identifying previously undiscovered coding as well as non-coding transcription. To-date, however, analyses of thes...
Kasper Munch, Paul P. Gardner, Peter Arctander, An...
105
Voted
ISMB
1996
15 years 4 months ago
Gene Recognition in Cyanobacterium Genomic Sequence Data Using the Hidden Markov Model
We have developed a hidden Markov model (HMM)to detect the protein coding regions within one megabase contiguous sequence data, registered in a database called GenBankin eight ent...
Tetsushi Yada, Makoto Hirosawa
155
Voted
BMCBI
2011
14 years 6 months ago
Software comparison for evaluating genomic copy number variation for Affymetrix 6.0 SNP array platform
Background: Copy number data are routinely being extracted from genome-wide association study chips using a variety of software. We empirically evaluated and compared four freely-...
Jeanette E. Eckel-Passow, Elizabeth J. Atkinson, S...
108
Voted
ISMB
1997
15 years 4 months ago
Identifying Chimerism in Proteins Using Hidden Markov Models of Codon Usage
Protein chimerism is a phenomenon involving the combination of multiple ancestral sequences into a single, multi-domain protein through evolution. We propose a novel method for de...
Lawrence Hunter, Barry Zeeberg