Growing sequencing and assembly efforts have been met by the advances in high throughput machines. However, the presence of massive amounts of repeats and transposons complicates ...
Nirmalya Bandyopadhyay, A. Mark Settles, Tamer Kah...
The process of gene assembly in ciliates, an ancient group of organisms, is one of the most complex instances of DNA manipulation known in any organisms. This process is fascinatin...
Tero Harju, Chang Li, Ion Petre, Grzegorz Rozenber...
: To facilitate research in comparative genomics, sequencing projects are increasingly aimed at assembling the genomes of closely related organisms. Given two incomplete assemblies...
Olaf Delgado Friedrichs, Aaron L. Halpern, Ross Li...
Subgraph patterns are widely used in graph classification, but their effectiveness is often hampered by large number of patterns or lack of discrimination power among individual p...
Abstract. As part of a larger project, we have built a declarative assembly language that enables us to specify multiple code paths to compute particular quantities, giving the ins...
Wolfram Kahl, Christopher Kumar Anand, Jacques Car...