Sciweavers

2612 search results - page 6 / 523
» Assemblies as Graph Processes
Sort
View
BCB
2010
156views Bioinformatics» more  BCB 2010»
13 years 2 months ago
RepFrag: a graph based method for finding repeats and transposons from fragmented genomes
Growing sequencing and assembly efforts have been met by the advances in high throughput machines. However, the presence of massive amounts of repeats and transposons complicates ...
Nirmalya Bandyopadhyay, A. Mark Settles, Tamer Kah...
DNA
2004
Springer
14 years 27 days ago
Parallelism in Gene Assembly
The process of gene assembly in ciliates, an ancient group of organisms, is one of the most complex instances of DNA manipulation known in any organisms. This process is fascinatin...
Tero Harju, Chang Li, Ion Petre, Grzegorz Rozenber...
GCB
2004
Springer
92views Biometrics» more  GCB 2004»
14 years 26 days ago
Syntenic Layout of Two Assemblies of Related Genomes
: To facilitate research in comparative genomics, sequencing projects are increasingly aimed at assembling the genomes of closely related organisms. Given two incomplete assemblies...
Olaf Delgado Friedrichs, Aaron L. Halpern, Ross Li...
CIKM
2009
Springer
14 years 2 months ago
Graph classification based on pattern co-occurrence
Subgraph patterns are widely used in graph classification, but their effectiveness is often hampered by large number of patterns or lack of discrimination power among individual p...
Ning Jin, Calvin Young, Wei Wang
RELMICS
2005
Springer
14 years 29 days ago
Control-Flow Semantics for Assembly-Level Data-Flow Graphs
Abstract. As part of a larger project, we have built a declarative assembly language that enables us to specify multiple code paths to compute particular quantities, giving the ins...
Wolfram Kahl, Christopher Kumar Anand, Jacques Car...