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BMCBI
2010
189views more  BMCBI 2010»
13 years 7 months ago
High quality protein sequence alignment by combining structural profile prediction and profile alignment using SABERTOOTH
Background: Protein alignments are an essential tool for many bioinformatics analyses. While sequence alignments are accurate for proteins of high sequence similarity, they become...
Florian Teichert, Jonas Minning, Ugo Bastolla, Mar...
26
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KDD
2008
ACM
199views Data Mining» more  KDD 2008»
14 years 8 months ago
Building semantic kernels for text classification using wikipedia
Document classification presents difficult challenges due to the sparsity and the high dimensionality of text data, and to the complex semantics of the natural language. The tradi...
Pu Wang, Carlotta Domeniconi
ALGORITHMICA
2006
74views more  ALGORITHMICA 2006»
13 years 7 months ago
Parallelizing Feature Selection
Classification is a key problem in machine learning/data mining. Algorithms for classification have the ability to predict the class of a new instance after having been trained on...
Jerffeson Teixeira de Souza, Stan Matwin, Nathalie...
BMCBI
2008
145views more  BMCBI 2008»
13 years 7 months ago
The contrasting properties of conservation and correlated phylogeny in protein functional residue prediction
Background: Amino acids responsible for structure, core function or specificity may be inferred from multiple protein sequence alignments where a limited set of residue types are ...
Jonathan R. Manning, Emily R. Jefferson, Geoffrey ...
ICASSP
2011
IEEE
12 years 11 months ago
Real-time conjugate gradients for online fMRI classification
Real-time functional magnetic resonance imaging (rtfMRI) enables classification of brain activity during data collection thus making inference results accessible to both the subj...
Hao Xu, Yongxin Taylor Xi, Ray Lee, Peter J. Ramad...