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BMCBI
2008
115views more  BMCBI 2008»
13 years 7 months ago
Improving peptide-MHC class I binding prediction for unbalanced datasets
Background: Establishment of peptide binding to Major Histocompatibility Complex class I (MHCI) is a crucial step in the development of subunit vaccines and prediction of such bin...
Ana Paula Sales, Georgia D. Tomaras, Thomas B. Kep...
ICML
1994
IEEE
13 years 11 months ago
Prototype and Feature Selection by Sampling and Random Mutation Hill Climbing Algorithms
With the goal of reducing computational costs without sacrificing accuracy, we describe two algorithms to find sets of prototypes for nearest neighbor classification. Here, the te...
David B. Skalak
BMCBI
2004
135views more  BMCBI 2004»
13 years 7 months ago
Information assessment on predicting protein-protein interactions
Background: Identifying protein-protein interactions is fundamental for understanding the molecular machinery of the cell. Proteome-wide studies of protein-protein interactions ar...
Nan Lin, Baolin Wu, Ronald Jansen, Mark Gerstein, ...
ISMIS
2000
Springer
13 years 11 months ago
Prediction of Ordinal Classes Using Regression Trees
This paper is devoted to the problem of learning to predict ordinal (i.e., ordered discrete) classes using classification and regression trees. We start with S-CART, a tree inducti...
Stefan Kramer, Gerhard Widmer, Bernhard Pfahringer...
ESANN
2006
13 years 8 months ago
Using sampling methods to improve binding site predictions
Currently the best algorithms for transcription factor binding site prediction are severely limited in accuracy. In previous work we combine random selection under-sampling with th...
Yi Sun, Mark Robinson, Rod Adams, Rene te Boekhors...