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BCB
2010
156views Bioinformatics» more  BCB 2010»
13 years 4 months ago
RepFrag: a graph based method for finding repeats and transposons from fragmented genomes
Growing sequencing and assembly efforts have been met by the advances in high throughput machines. However, the presence of massive amounts of repeats and transposons complicates ...
Nirmalya Bandyopadhyay, A. Mark Settles, Tamer Kah...
IWPC
2003
IEEE
14 years 2 months ago
Generalized Selective XML Markup of Source Code Using Agile Parsing
Increasingly focus in the software comprehension community is shifting from representing the results of analysis in the graph and database domain to reflecting insights directly i...
James R. Cordy
TII
2010
113views Education» more  TII 2010»
13 years 3 months ago
An Automated Framework for Formal Verification of Timed Continuous Petri Nets
In this paper, we develop an automated framework for formal verification of timed continuous Petri nets (ContPNs). Specifically, we consider two problems: (1) given an initial set ...
Marius Kloetzer, Cristian Mahulea, Calin Belta, Ma...
CORR
2010
Springer
164views Education» more  CORR 2010»
13 years 9 months ago
Schnyder decompositions for regular plane graphs and application to drawing
Schnyder woods are decompositions of simple triangulations into three edge-disjoint spanning trees crossing each other in a specific way. In this article, we define a generalizatio...
Olivier Bernardi, Éric Fusy
CORR
1999
Springer
164views Education» more  CORR 1999»
13 years 8 months ago
Annotation graphs as a framework for multidimensional linguistic data analysis
In recent work we have presented a formal framework for linguistic annotation based on labeled acyclic digraphs. These `annotation graphs' oer a simple yet powerful method fo...
Steven Bird, Mark Liberman