Sciweavers

126 search results - page 7 / 26
» Automated Alignment of RNA Sequences to Pseudoknotted Struct...
Sort
View
NAR
1998
140views more  NAR 1998»
13 years 8 months ago
Compilation of tRNA sequences and sequences of tRNA genes
Sequences of 3279 sequences of tRNA genes and tRNAs published up to December 1996 are included in the compilation. Alignment of the sequences, which is most compatible with the tR...
Mathias Sprinzl, Carsten Horn, Melissa Brown, Anat...
BMCBI
2004
190views more  BMCBI 2004»
13 years 8 months ago
RAG: RNA-As-Graphs web resource
Background: The proliferation of structural and functional studies of RNA has revealed an increasing range of RNA's structural repertoire. Toward the objective of systematic ...
Daniela Fera, Namhee Kim, Nahum Shiffeldrim, Julie...
BMCBI
2011
13 years 3 months ago
R2R - software to speed the depiction of aesthetic consensus RNA secondary structures
Background: With continuing identification of novel structured noncoding RNAs, there is an increasing need to create schematic diagrams showing the consensus features of these mol...
Zasha Weinberg, Ronald R. Breaker
CPM
2004
Springer
156views Combinatorics» more  CPM 2004»
14 years 1 months ago
A Computational Model for RNA Multiple Structural Alignment.
Abstract. This paper addresses the problem of aligning multiple sequences of non-coding RNA genes. We approach this problem with the biologically motivated paradigm that scoring of...
Eugene Davydov, Serafim Batzoglou
ICASSP
2008
IEEE
14 years 3 months ago
Probabilistic structural alignment of RNA sequences
We propose an algorithm for estimating the common secondary structure, alignment, and posterior base pairing probabilities for two RNA sequences. A definition of structural align...
Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...