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» Automated Extraction of Problem Structure
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BMCBI
2008
138views more  BMCBI 2008»
15 years 2 months ago
Using neural networks and evolutionary information in decoy discrimination for protein tertiary structure prediction
Background: We present a novel method of protein fold decoy discrimination using machine learning, more specifically using neural networks. Here, decoy discrimination is represent...
Ching-Wai Tan, David T. Jones
BMCBI
2005
84views more  BMCBI 2005»
15 years 2 months ago
A method of precise mRNA/DNA homology-based gene structure prediction
Background: Accurate and automatic gene finding and structural prediction is a common problem in bioinformatics, and applications need to be capable of handling non-canonical spli...
Alexander G. Churbanov, Mark Pauley, Daniel Quest,...
IMC
2006
ACM
15 years 8 months ago
Semi-automated discovery of application session structure
While the problem of analyzing network traffic at the granularity of individual connections has seen considerable previous work and tool development, understanding traffic at a ...
Jayanthkumar Kannan, Jaeyeon Jung, Vern Paxson, Ca...
BMCBI
2010
129views more  BMCBI 2010»
15 years 2 months ago
Automatic prediction of catalytic residues by modeling residue structural neighborhood
Background: Prediction of catalytic residues is a major step in characterizing the function of enzymes. In its simpler formulation, the problem can be cast into a binary classific...
Elisa Cilia, Andrea Passerini
SPIN
2012
Springer
13 years 4 months ago
Counterexample Explanation by Anomaly Detection
Since counterexamples generated by model checking tools are only symptoms of faults in the model, a significant amount of manual work is required in order to locate the fault that...
Stefan Leue, Mitra Tabaei Befrouei