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ISPASS
2009
IEEE
14 years 3 months ago
Analyzing CUDA workloads using a detailed GPU simulator
Modern Graphic Processing Units (GPUs) provide sufficiently flexible programming models that understanding their performance can provide insight in designing tomorrow’s manyco...
Ali Bakhoda, George L. Yuan, Wilson W. L. Fung, He...
JPDC
2006
106views more  JPDC 2006»
13 years 8 months ago
Adaptive algorithms for the dynamic distribution and parallel execution of agent-based models
We propose a framework for defining agent-based models (ABMs) and two algorithms for the automatic parallelization of agent-based models, a general version P-ABMG for all ABMs def...
Matthias Scheutz, Paul W. Schermerhorn
BMCBI
2010
132views more  BMCBI 2010»
13 years 8 months ago
Parallel multiplicity and error discovery rate (EDR) in microarray experiments
Background: In microarray gene expression profiling experiments, differentially expressed genes (DEGs) are detected from among tens of thousands of genes on an array using statist...
Wayne Wenzhong Xu, Clay J. Carter
IPPS
2006
IEEE
14 years 2 months ago
A job monitoring system for the LCG computing grid
Experience with generating simulation data of high energy physics experiments has shown that a job monitoring system (JMS) is essential to understand failures of jobs within the G...
Ahmad Hammad, T. Harenberg, D. Igdalov, P. Mä...
CMSB
2008
Springer
13 years 10 months ago
Automatic Complexity Analysis and Model Reduction of Nonlinear Biochemical Systems
Kinetic models for biochemical systems often comprise a large amount of coupled differential equations with species concentrations varying on different time scales. In this paper w...
Dirk Lebiedz, Dominik Skanda, Marc Fein