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LBM
2007
13 years 8 months ago
Syntactic Features for Protein-Protein Interaction Extraction
Background: Extracting Protein-Protein Interactions (PPI) from research papers is a way of translating information from English to the language used by the databases that store th...
Rune Sætre, Kenji Sagae, Jun-ichi Tsujii
BMCBI
2006
153views more  BMCBI 2006»
13 years 6 months ago
Automatic document classification of biological literature
Background: Document classification is a wide-spread problem with many applications, from organizing search engine snippets to spam filtering. We previously described Textpresso, ...
David Chen, Hans-Michael Müller, Paul W. Ster...
VLDB
2002
ACM
161views Database» more  VLDB 2002»
13 years 6 months ago
Distributed Search over the Hidden Web: Hierarchical Database Sampling and Selection
Many valuable text databases on the web have non-crawlable contents that are "hidden" behind search interfaces. Metasearchers are helpful tools for searching over many s...
Panagiotis G. Ipeirotis, Luis Gravano
IJCAI
2007
13 years 8 months ago
Integration of Hybrid Bio-Ontologies using Bayesian Networks for Knowledge Discovery
This paper describes how high level biological knowledge obtained from ontologies such as the Gene Ontology (GO) can be integrated with low level information extracted from a Baye...
Kenneth McGarry, Sheila Garfield, Nick Morris, Ste...
BMCBI
2005
122views more  BMCBI 2005»
13 years 6 months ago
Finding genomic ontology terms in text using evidence content
Background: The development of text mining systems that annotate biological entities with their properties using scientific literature is an important recent research topic. These...
Francisco M. Couto, Mário J. Silva, Pedro C...