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» BARD: A visualization tool for biological sequence analysis
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CSB
2002
IEEE
103views Bioinformatics» more  CSB 2002»
14 years 1 months ago
Protein-Based Analysis of Alternative Splicing in the Human Genome
Understanding the functional significance of alternative splicing and other mechanisms that generate RNA transcript diversity is an important challenge facing modern-day molecular...
Ann E. Loraine, Gregg A. Helt, Melissa S. Cline, M...
IPPS
2003
IEEE
14 years 1 months ago
PROSIDIS: A Special Purpose Processor for PROtein SImilarity DIScovery
This work presents the architecture of PROSIDIS, a special purpose processor designed to search for the occurrence of substrings similar to a given ‘template string’ within a ...
Alessandro Marongiu, Paolo Palazzari, Vittorio Ros...
CDC
2008
IEEE
125views Control Systems» more  CDC 2008»
14 years 2 months ago
Dynamical structure analysis of sparsity and minimality heuristics for reconstruction of biochemical networks
— Network reconstruction, i.e. obtaining network structure from input-output information, is a central theme in systems biology. A variety of approaches aim to obtaining structur...
Russell Howes, Lee John Eccleston, Jorge M. Goncal...
NAR
2008
85views more  NAR 2008»
13 years 8 months ago
Panzea: an update on new content and features
Panzea (http://www.panzea.org), the public web site of the project `Molecular and Functional Diversity in the Maize Genome', has expanded over the past two years in data cont...
Payan Canaran, Edward S. Buckler, Jeffrey Glaubitz...
WOB
2003
140views Bioinformatics» more  WOB 2003»
13 years 9 months ago
Computing Maximum Subsequence in Parallel
The maximum subsequence problem finds the contiguous subsequence of n real numbers with the highest sum. This is an important problem that arises in several contexts in Computatio...
Carlos E. R. Alves, Edson Cáceres, Siang W....