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IJBRA
2007
89views more  IJBRA 2007»
13 years 7 months ago
Conservative adjustment of permutation p-values when the number of permutations is limited
The permutation procedure is widely used to assess the significance level (p-value) of a test statistic. This approach is asymptotically consistent. In genomics and proteomics st...
Yinglei Lai
BMCBI
2005
77views more  BMCBI 2005»
13 years 7 months ago
The Gene Set Builder: collation, curation, and distribution of sets of genes
Background: In bioinformatics and genomics, there are many applications designed to investigate the common properties for a set of genes. Often, these multi-gene analysis tools at...
Dimas Yusuf, Jonathan S. Lim, Wyeth W. Wasserman
BMCBI
2004
126views more  BMCBI 2004»
13 years 7 months ago
Visualising very large phylogenetic trees in three dimensional hyperbolic space
Background: Common existing phylogenetic tree visualisation tools are not able to display readable trees with more than a few thousand nodes. These existing methodologies are base...
Timothy Hughes, Young Hyun, David A. Liberles
TODS
2002
92views more  TODS 2002»
13 years 7 months ago
Searching in metric spaces with user-defined and approximate distances
Metric access methods (MAMs), such as the M-tree, are powerful index structures for supporting ty queries on metric spaces, which represent a common abstraction for those searchin...
Paolo Ciaccia, Marco Patella
BIBM
2010
IEEE
180views Bioinformatics» more  BIBM 2010»
13 years 5 months ago
CAMBer: An approach to support comparative analysis of multiple bacterial strains
There is a large amount of inconsistency in gene structure annotations of bacterial strains. This inconsistency is a frustrating impedance to effective comparative genomic analysi...
Michal Wozniak, Limsoon Wong, Jerzy Tiuryn