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BMCBI
2008
166views more  BMCBI 2008»
13 years 6 months ago
QuantPrime - a flexible tool for reliable high-throughput primer design for quantitative PCR
Background: Medium- to large-scale expression profiling using quantitative polymerase chain reaction (qPCR) assays are becoming increasingly important in genomics research. A majo...
Samuel Arvidsson, Miroslaw Kwasniewski, Diego Maur...
BIB
2011
12 years 11 months ago
Using cross-validation to evaluate predictive accuracy of survival risk classifiers based on high-dimensional data
Developments in whole genome biotechnology have stimulated statistical focus on prediction methods. We review here methodology for classifying patients into survival risk groups a...
Richard M. Simon, Jyothi Subramanian, Ming-Chung L...
BMCBI
2011
12 years 11 months ago
A user-friendly web portal for T-Coffee on supercomputers
Background: Parallel T-Coffee (PTC) was the first parallel implementation of the T-Coffee multiple sequence alignment tool. It is based on MPI and RMA mechanisms. Its purpose is t...
Josep Rius Torrento, Fernando Cores, Francesc Sols...
BMCBI
2011
12 years 11 months ago
A Novel And Well-Defined Benchmarking Method For Second Generation Read Mapping
Background: Second generation sequencing technologies yield DNA sequence data at ultra high-throughput. Common to most biological applications is a mapping of the reads to an almo...
Manuel Holtgrewe, Anne-Katrin Emde, David Weese, K...
IROS
2007
IEEE
162views Robotics» more  IROS 2007»
14 years 1 months ago
Comparative evaluation of robotic software integration systems: A case study
— One might expect that after nearly 50 years of research in robot manipulation and mobile robotics the architectural design of robot systems has converged to a small set of best...
Azamat Shakhimardanov, Erwin Prassler