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KDD
2009
ACM
191views Data Mining» more  KDD 2009»
14 years 9 months ago
Scalable pseudo-likelihood estimation in hybrid random fields
Learning probabilistic graphical models from high-dimensional datasets is a computationally challenging task. In many interesting applications, the domain dimensionality is such a...
Antonino Freno, Edmondo Trentin, Marco Gori
WABI
2009
Springer
129views Bioinformatics» more  WABI 2009»
14 years 3 months ago
biRNA: Fast RNA-RNA Binding Sites Prediction
We present biRNA, a novel algorithm for prediction of binding sites between two RNAs based on minimization of binding free energy. Similar to RNAup approach [30], we assume the bin...
Hamidreza Chitsaz, Rolf Backofen, Süleyman Ce...
KDD
1999
ACM
128views Data Mining» more  KDD 1999»
14 years 26 days ago
Towards Automated Synthesis of Data Mining Programs
Code synthesis is routinely used in industry to generate GUIs, form lling applications, and database support code and is even used with COBOL. In this paper we consider the questi...
Wray L. Buntine, Bernd Fischer 0002, Thomas Pressb...
SDM
2007
SIAM
184views Data Mining» more  SDM 2007»
13 years 10 months ago
Mining Naturally Smooth Evolution of Clusters from Dynamic Data
Many clustering algorithms have been proposed to partition a set of static data points into groups. In this paper, we consider an evolutionary clustering problem where the input d...
Yi Wang, Shi-Xia Liu, Jianhua Feng, Lizhu Zhou
BMCBI
2010
153views more  BMCBI 2010»
13 years 8 months ago
Metamotifs - a generative model for building families of nucleotide position weight matrices
Background: Development of high-throughput methods for measuring DNA interactions of transcription factors together with computational advances in short motif inference algorithms...
Matias Piipari, Thomas A. Down, Tim J. P. Hubbard