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BMCBI
2010
144views more  BMCBI 2010»
13 years 8 months ago
Finding sRNA generative locales from high-throughput sequencing data with NiBLS
Background: Next-generation sequencing technologies allow researchers to obtain millions of sequence reads in a single experiment. One important use of the technology is the seque...
Daniel MacLean, Vincent Moulton, David J. Studholm...
BMCBI
2010
147views more  BMCBI 2010»
13 years 8 months ago
Learning biological network using mutual information and conditional independence
Background: Biological networks offer us a new way to investigate the interactions among different components and address the biological system as a whole. In this paper, a revers...
Dong-Chul Kim, Xiaoyu Wang, Chin-Rang Yang, Jean G...
CORR
2008
Springer
150views Education» more  CORR 2008»
13 years 8 months ago
Message-passing for Maximum Weight Independent Set
Abstract--In this paper, we investigate the use of messagepassing algorithms for the problem of finding the max-weight independent set (MWIS) in a graph. First, we study the perfor...
Sujay Sanghavi, Devavrat Shah, Alan S. Willsky
BMCBI
2006
195views more  BMCBI 2006»
13 years 8 months ago
Hubs of knowledge: using the functional link structure in Biozon to mine for biologically significant entities
Background: Existing biological databases support a variety of queries such as keyword or definition search. However, they do not provide any measure of relevance for the instance...
Paul Shafer, Timothy Isganitis, Golan Yona
CN
2006
70views more  CN 2006»
13 years 8 months ago
Small-world characteristics of Internet topologies and implications on multicast scaling
Recent work has shown that the physical connectivity of the Internet exhibits small-world behavior. Characterizing such behavior is important not only for generating realistic Int...
Shudong Jin, Azer Bestavros