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» Biclustering of Expression Data Using Simulated Annealing
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BMCBI
2010
97views more  BMCBI 2010»
13 years 6 months ago
Preprocessing of gene expression data by optimally robust estimators
Background: The preprocessing of gene expression data obtained from several platforms routinely includes the aggregation of multiple raw signal intensities to one expression value...
Matthias Kohl, Hans-Peter Deigner
BMCBI
2006
148views more  BMCBI 2006»
13 years 8 months ago
Exploiting the full power of temporal gene expression profiling through a new statistical test: Application to the analysis of m
Background: The identification of biologically interesting genes in a temporal expression profiling dataset is challenging and complicated by high levels of experimental noise. Mo...
Veronica Vinciotti, Xiaohui Liu, Rolf Turk, Emile ...
BMCBI
2010
148views more  BMCBI 2010»
13 years 8 months ago
Applying unmixing to gene expression data for tumor phylogeny inference
Background: While in principle a seemingly infinite variety of combinations of mutations could result in tumor development, in practice it appears that most human cancers fall int...
Russell Schwartz, Stanley Shackney
VISSYM
2007
13 years 11 months ago
Integrating Local Feature Detectors in the Interactive Visual Analysis of Flow Simulation Data
We present smooth formulations of common vortex detectors that allow a seamless integration into the concept of interactive visual analysis of flow simulation data. We express the...
Raphael Buerger, Philipp Muigg, Martin Ilcí...
BMCBI
2007
135views more  BMCBI 2007»
13 years 8 months ago
Measuring similarities between gene expression profiles through new data transformations
Background: Clustering methods are widely used on gene expression data to categorize genes with similar expression profiles. Finding an appropriate (dis)similarity measure is crit...
Kyungpil Kim, Shibo Zhang, Keni Jiang, Li Cai, In-...